STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_15652Nuclear RNA export factor 1. (529 aa)    
Predicted Functional Partners:
ALC57_00738
NTF2-related export protein.
    
 0.992
ALC57_07191
RNA and export factor-binding protein 2.
    
 0.989
ALC57_01842
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.986
ALC57_10716
mRNA export factor.
    
 0.983
ALC57_01569
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 0.977
ALC57_12490
Uncharacterized protein.
   
 0.965
ALC57_13653
Regulator of nonsense transcripts 3A.
    
 0.964
ALC57_13118
Nuclear pore glycoprotein p62.
    
 0.964
ALC57_06111
Uncharacterized protein.
    
 0.961
ALC57_16588
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.954
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.