STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_11804Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
ALC57_03523
BRCA1-associated RING domain protein 1.
    
 0.844
ALC57_10061
BRCA1-A complex subunit MERIT40.
    
 0.705
ALC57_08660
60S ribosomal protein L21.
   
   0.635
ALC57_16109
Ubiquitin-60S ribosomal protein L40.
    
  0.616
ALC57_00329
Protein bcn92; Belongs to the complex I LYR family.
    
 0.594
ALC57_08111
60S ribosomal protein L8.
   
 
 0.568
ALC57_18840
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.566
ALC57_14932
39S ribosomal protein L2, mitochondrial.
   
 
 0.533
ALC57_16714
Double-strand break repair protein MRE11A.
    
  0.502
ALC57_05049
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.489
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.