STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_09736Malignant T cell-amplified sequence 1. (188 aa)    
Predicted Functional Partners:
ALC57_06240
Density-regulated protein; Belongs to the DENR family.
   
 
 0.993
ALC57_04549
Protein translation factor SUI1 like protein.
   
 
 0.961
ALC57_10619
40S ribosomal protein S28.
    
   0.912
ALC57_03214
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.897
ALC57_08443
40S ribosomal protein S3a.
    
 
 0.890
ALC57_04009
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.888
ALC57_16635
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
   0.885
ALC57_11148
40S ribosomal protein S20.
   
   0.874
ALC57_05464
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.872
ALC57_04544
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.868
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.