ALC57_05837 protein (Trachymyrmex cornetzi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALC57_05837

Uncharacterized protein. (169 aa)

Predicted Functional Partners:

ALC57_18138

0.709

ALC57_18499

0.685

ALC57_04037

0.685

ALC57_04039

0.685

ALC57_04578

0.624

ALC57_16937

0.597

ALC57_13419

0.597

ALC57_15474

0.575

ALC57_16221

0.575

ALC57_15578

0.571

Your Current Organism:

Trachymyrmex cornetzi

NCBI taxonomy Id: 471704
Other names: T. cornetzi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC57_04037	ALC57_05837	A0A151JEY8	A0A151J9T9	Uncharacterized protein.	Uncharacterized protein.	0.685
ALC57_04039	ALC57_05837	A0A151JF13	A0A151J9T9	Uncharacterized protein.	Uncharacterized protein.	0.685
ALC57_04578	ALC57_05837	A0A195ECG0	A0A151J9T9	RING-type domain-containing protein.	Uncharacterized protein.	0.624
ALC57_04578	ALC57_13419	A0A195ECG0	A0A195DN43	RING-type domain-containing protein.	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	0.750
ALC57_04578	ALC57_16937	A0A195ECG0	A0A151IUH9	RING-type domain-containing protein.	Spermatogenesis-associated protein 5.	0.750
ALC57_04578	ALC57_18138	A0A195ECG0	A0A195DB29	RING-type domain-containing protein.	Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.	0.657
ALC57_05837	ALC57_04037	A0A151J9T9	A0A151JEY8	Uncharacterized protein.	Uncharacterized protein.	0.685
ALC57_05837	ALC57_04039	A0A151J9T9	A0A151JF13	Uncharacterized protein.	Uncharacterized protein.	0.685
ALC57_05837	ALC57_04578	A0A151J9T9	A0A195ECG0	Uncharacterized protein.	RING-type domain-containing protein.	0.624
ALC57_05837	ALC57_13419	A0A151J9T9	A0A195DN43	Uncharacterized protein.	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	0.597
ALC57_05837	ALC57_15474	A0A151J9T9	A0A151IX27	Uncharacterized protein.	ATP-binding cassette sub-family B member 7, mitochondrial.	0.575
ALC57_05837	ALC57_15578	A0A151J9T9	A0A151IWS7	Uncharacterized protein.	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.571
ALC57_05837	ALC57_16221	A0A151J9T9	A0A195DFL3	Uncharacterized protein.	ATP-binding cassette sub-family B member 6, mitochondrial.	0.575
ALC57_05837	ALC57_16937	A0A151J9T9	A0A151IUH9	Uncharacterized protein.	Spermatogenesis-associated protein 5.	0.597
ALC57_05837	ALC57_18138	A0A151J9T9	A0A195DB29	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.	0.709
ALC57_05837	ALC57_18499	A0A151J9T9	A0A151IS07	Uncharacterized protein.	ATP-sensitive inward rectifier potassium channel 12.	0.685
ALC57_13419	ALC57_04578	A0A195DN43	A0A195ECG0	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	RING-type domain-containing protein.	0.750
ALC57_13419	ALC57_05837	A0A195DN43	A0A151J9T9	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.597
ALC57_13419	ALC57_18138	A0A195DN43	A0A195DB29	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.	0.607
ALC57_15474	ALC57_05837	A0A151IX27	A0A151J9T9	ATP-binding cassette sub-family B member 7, mitochondrial.	Uncharacterized protein.	0.575