STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_04648Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
ALC57_06779
Transcription initiation factor TFIID subunit 7.
    
 
 0.891
ALC57_14427
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.889
ALC57_18218
DNA methyltransferase 1-associated protein 1.
    
 
 0.822
ALC57_03540
Transcription initiation factor TFIID subunit.
    
 
 0.812
ALC57_11105
Cell division protein kinase 9; Belongs to the protein kinase superfamily.
    
 
 0.808
ALC57_16471
Bifunctional arginine demethylase and lysyl-hydroxylase PSR.
    
 
 0.804
ALC57_01887
CREB-binding protein.
   
 0.766
ALC57_16140
Transcription factor E2F3.
    
 
 0.765
ALC57_12212
Transcription factor E2F5.
    
 
 0.765
ALC57_13703
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 
 0.762
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.