STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC57_02347SET and MYND domain-containing protein 5. (210 aa)    
Predicted Functional Partners:
ALC57_14427
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.842
ALC57_07381
Polycomb protein eed-A.
    
 0.803
ALC57_15901
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.799
ALC57_07985
Retinoblastoma-binding protein 5.
    
 0.799
ALC57_13652
Polycomb protein Suz12.
    
 0.795
ALC57_06914
Putative histone-binding protein Caf1.
    
 0.780
ALC57_06835
PHD finger protein 20-like protein 1.
   
 0.756
ALC57_04552
Putative 26S proteasome non-ATPase regulatory subunit 3.
    
 0.733
ALC57_12447
Histone-lysine N-methyltransferase SETD1B.
    
 0.718
ALC57_06157
Histone domain-containing protein.
   
 0.714
Your Current Organism:
Trachymyrmex cornetzi
NCBI taxonomy Id: 471704
Other names: T. cornetzi
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