Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC57_02347 | ALC57_04552 | A0A195EJH1 | A0A195ED72 | SET and MYND domain-containing protein 5. | Putative 26S proteasome non-ATPase regulatory subunit 3. | 0.733 |
ALC57_02347 | ALC57_06157 | A0A195EJH1 | A0A151J949 | SET and MYND domain-containing protein 5. | Histone domain-containing protein. | 0.714 |
ALC57_02347 | ALC57_06835 | A0A195EJH1 | A0A195E6W8 | SET and MYND domain-containing protein 5. | PHD finger protein 20-like protein 1. | 0.756 |
ALC57_02347 | ALC57_06914 | A0A195EJH1 | A0A195E7D5 | SET and MYND domain-containing protein 5. | Putative histone-binding protein Caf1. | 0.780 |
ALC57_02347 | ALC57_07381 | A0A195EJH1 | A0A195E5K6 | SET and MYND domain-containing protein 5. | Polycomb protein eed-A. | 0.803 |
ALC57_02347 | ALC57_07985 | A0A195EJH1 | A0A195E3R0 | SET and MYND domain-containing protein 5. | Retinoblastoma-binding protein 5. | 0.799 |
ALC57_02347 | ALC57_12447 | A0A195EJH1 | A0A195DRA3 | SET and MYND domain-containing protein 5. | Histone-lysine N-methyltransferase SETD1B. | 0.718 |
ALC57_02347 | ALC57_13652 | A0A195EJH1 | A0A195DMF7 | SET and MYND domain-containing protein 5. | Polycomb protein Suz12. | 0.795 |
ALC57_02347 | ALC57_14427 | A0A195EJH1 | A0A195D9Z2 | SET and MYND domain-containing protein 5. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.842 |
ALC57_02347 | ALC57_15901 | A0A195EJH1 | A0A151IW66 | SET and MYND domain-containing protein 5. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.799 |
ALC57_04552 | ALC57_02347 | A0A195ED72 | A0A195EJH1 | Putative 26S proteasome non-ATPase regulatory subunit 3. | SET and MYND domain-containing protein 5. | 0.733 |
ALC57_04552 | ALC57_12447 | A0A195ED72 | A0A195DRA3 | Putative 26S proteasome non-ATPase regulatory subunit 3. | Histone-lysine N-methyltransferase SETD1B. | 0.413 |
ALC57_06157 | ALC57_02347 | A0A151J949 | A0A195EJH1 | Histone domain-containing protein. | SET and MYND domain-containing protein 5. | 0.714 |
ALC57_06157 | ALC57_06835 | A0A151J949 | A0A195E6W8 | Histone domain-containing protein. | PHD finger protein 20-like protein 1. | 0.960 |
ALC57_06157 | ALC57_06914 | A0A151J949 | A0A195E7D5 | Histone domain-containing protein. | Putative histone-binding protein Caf1. | 0.971 |
ALC57_06157 | ALC57_07381 | A0A151J949 | A0A195E5K6 | Histone domain-containing protein. | Polycomb protein eed-A. | 0.927 |
ALC57_06157 | ALC57_07985 | A0A151J949 | A0A195E3R0 | Histone domain-containing protein. | Retinoblastoma-binding protein 5. | 0.965 |
ALC57_06157 | ALC57_12447 | A0A151J949 | A0A195DRA3 | Histone domain-containing protein. | Histone-lysine N-methyltransferase SETD1B. | 0.969 |
ALC57_06157 | ALC57_13652 | A0A151J949 | A0A195DMF7 | Histone domain-containing protein. | Polycomb protein Suz12. | 0.927 |
ALC57_06157 | ALC57_14427 | A0A151J949 | A0A195D9Z2 | Histone domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
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