STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGRD_068Putative mannonate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (277 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
 
 0.958
TGRD_595
Aldehyde-alcohol dehydrogenase; ADH/ACDH; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.939
TGRD_584
Homocysteine S-methyltransferase.
   
 
 0.875
TGRD_070
2-dehydro-3-deoxygluconokinase; KDG kinase.
  
 0.861
TGRD_596
Electron transfer flavoprotein alpha subunit; alpha-ETF.
  
 0.840
uxaC
Glucuronate isomerase.
 
  
 0.808
TGRD_071
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase; KHG/KDPG aldolase.
  
  
 0.741
TGRD_603
S-malonyltransferase.
  
 0.704
TGRD_590
Conserved hypothetical protein; Contains ferredoxin domain.
    
  0.634
TGRD_557
3-oxoacyl-[acyl-carrier-protein] synthase II; KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  0.614
Your Current Organism:
uncultured Termite group 1 bacterium phylotype
NCBI taxonomy Id: 471821
Other names: u. Termite group 1 bacterium phylotype Rs-D17, uncultured Termite group 1 bacterium phylotype Rs-D17
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