STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGRD_269NifU-like Fe-S cluster assembly protein. (125 aa)    
Predicted Functional Partners:
TGRD_268
Cysteine desulfurase.
  
 0.994
TGRD_520
Cysteine desulfurase.
  
 0.974
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.913
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.784
TGRD_696
CL synthase.
   
   0.768
TGRD_734
Conserved hypothetical protein; Contains NifU domain.
  
 
 0.609
TGRD_267
Rubredoxin.
       0.607
TGRD_596
Electron transfer flavoprotein alpha subunit; alpha-ETF.
  
  
 0.494
TGRD_523
NAD-dependent Fe-hydrogenase 51kDa NADH dehydrogenase component.
  
  
 0.488
TGRD_270
Anaerobic nitric oxide reductase.
  
  
 0.481
Your Current Organism:
uncultured Termite group 1 bacterium phylotype
NCBI taxonomy Id: 471821
Other names: u. Termite group 1 bacterium phylotype Rs-D17, uncultured Termite group 1 bacterium phylotype Rs-D17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.