STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGRD_279Pyruvate:ferredoxin oxidoreductase delta subunit; PFOR. (103 aa)    
Predicted Functional Partners:
TGRD_280
Pyruvate:ferredoxin oxidoreductase alpha subunit; PFOR.
 
 0.983
TGRD_281
Pyruvate:ferredoxin oxidoreductase beta subunit; PFOR.
 
 0.973
TGRD_278
Pyruvate:ferredoxin oxidoreductase gamma subunit; PFOR.
 
 0.965
TGRD_595
Aldehyde-alcohol dehydrogenase; ADH/ACDH; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.920
TGRD_523
NAD-dependent Fe-hydrogenase 51kDa NADH dehydrogenase component.
    
 0.901
TGRD_245
2-oxoglutarate synthase beta subunit.
  
 0.825
TGRD_246
2-oxoglutarate synthase alpha subunit.
  
 0.822
TGRD_522
NAD-dependent Fe-hydrogenase catalytic component.
    
 0.620
accA
acetyl-CoA carboxylase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
    
  0.533
TGRD_165
Carbamoyl-phosphate synthase arginine-specific large chain.
     
 0.525
Your Current Organism:
uncultured Termite group 1 bacterium phylotype
NCBI taxonomy Id: 471821
Other names: u. Termite group 1 bacterium phylotype Rs-D17, uncultured Termite group 1 bacterium phylotype Rs-D17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.