STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0010PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B0885 putative lyase. (136 aa)    
Predicted Functional Partners:
Tcur_0009
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cti:RALTA_B0884 putative transcriptional regulator, AraC family, isolated domain.
 
     0.955
Tcur_1659
PFAM: ABC transporter related; KEGG: scl:sce6315 excinuclease ABC subunit A.
     0.557
Tcur_2032
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ade:Adeh_3813 hypothetical protein.
 
     0.535
Tcur_1362
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: xac:XAC0581 AraC family transcriptional regulator.
 
     0.488
Tcur_0362
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SM_b20217 hypothetical protein.
 
   
 0.469
Tcur_4172
PFAM: Helix-turn-helix type 11 domain protein; KEGG: scl:sce5223 DeoR family transcriptional regulator.
 
    0.406
Tcur_4549
PFAM: Helix-turn-helix type 11 domain protein; protein of unknown function UPF0074; KEGG: scl:sce5223 DeoR family transcriptional regulator.
 
    0.403
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.