STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0104PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hch:HCH_02036 amidohydrolase. (234 aa)    
Predicted Functional Partners:
Tcur_3380
PFAM: aminotransferase class-III; KEGG: hypothetical protein; K00827 alanine-- glyoxylate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.529
Tcur_0105
KEGG: scl:sce5500 hypothetical protein.
  
    0.485
Tcur_1724
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
    
 0.449
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
   
 
 0.448
Tcur_3201
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cak:Caul_0148 amine oxidase.
  
  
 0.446
Tcur_3032
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpy:Bphyt_4247 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
  
 0.409
Tcur_4190
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
 0.407
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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