STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0106Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: ank:AnaeK_2686 regulatory protein TetR. (227 aa)    
Predicted Functional Partners:
Tcur_0105
KEGG: scl:sce5500 hypothetical protein.
 
     0.879
Tcur_1604
KEGG: aeh:Mlg_2364 hypothetical protein.
  
     0.567
Tcur_0434
KEGG: mno:Mnod_6880 hypothetical protein.
  
     0.564
Tcur_1605
PFAM: Radical SAM domain protein; KEGG: pzu:PHZ_c2389 hypothetical protein.
  
     0.479
Tcur_0319
PFAM: Carboxymuconolactone decarboxylase; KEGG: dol:Dole_1053 carboxymuconolactone decarboxylase.
 
     0.440
Tcur_0436
PFAM: regulatory protein TetR; KEGG: dal:Dalk_1538 transcriptional regulator, TetR family.
  
     0.437
Tcur_0511
PFAM: regulatory protein TetR; KEGG: bmj:BMULJ_04575 transcriptional regulatory protein.
  
     0.435
Tcur_1849
KEGG: mpt:Mpe_B0038 hypothetical protein.
  
     0.419
Tcur_0515
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
     0.412
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.