STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0231Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pap:PSPA7_1798 hypothetical protein. (250 aa)    
Predicted Functional Partners:
Tcur_2251
KEGG: bmj:BMULJ_04868 putative metal-dependent hydrolase.
 
     0.714
Tcur_0436
PFAM: regulatory protein TetR; KEGG: dal:Dalk_1538 transcriptional regulator, TetR family.
  
     0.642
Tcur_0228
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bac:BamMC406_1201 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.582
Tcur_1834
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: pae:PA2097 flavin-binding monooxygenase.
     0.531
Tcur_4918
PFAM: regulatory protein TetR; KEGG: dol:Dole_0816 TetR family transcriptional regulator.
  
     0.525
Tcur_0230
Putative transcriptional regulator, PucR family; KEGG: avn:Avin_43380 carbohydrate diacid transcriptional regulator.
       0.512
Tcur_2250
PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_3331 alpha/beta hydrolase fold.
  
     0.485
Tcur_3835
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bac:BamMC406_4526 flavin-containing monooxygenase FMO.
     0.477
Tcur_3952
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pae:PA2096 transcriptional regulator.
  
 
 0.472
Tcur_0565
Flavoprotein involved in K+ transport-like protein; KEGG: bam:Bamb_5336 alpha/beta hydrolase domain- containing protein.
     0.448
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.