STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0439PFAM: GtrA family protein; glycosyl transferase family 2; KEGG: ppd:Ppro_2693 glycosyl transferase family protein. (425 aa)    
Predicted Functional Partners:
Tcur_0438
PFAM: glycosyl transferase family 39; KEGG: cti:RALTA_A1339 putative glycosyl transferase, family 39.
  
 0.973
Tcur_0437
PFAM: glycosyl transferase family 39; KEGG: acp:A2cp1_2390 transcriptional regulator, Fis family.
  
 0.966
Tcur_1001
KEGG: ank:AnaeK_1404 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.650
Tcur_2437
PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gbm:Gbem_3402 nucleotidyl transferase.
  
 
 0.525
Tcur_0638
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_2107 ABC transporter related.
  
  
 0.504
Tcur_0859
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_3694 ABC transporter related.
  
  
 0.504
Tcur_0440
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_C7291 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.501
Tcur_2791
PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: pca:Pcar_1129 dTDP-4-dehydrorhamnose 3,5- epimerase.
  
  
 0.491
Tcur_3993
PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_3028 glycosyl transferase family protein.
 
 
 0.483
Tcur_1010
PFAM: lipopolysaccharide biosynthesis protein; KEGG: scl:sce7318 protein tyrosine kinase.
  
  
 0.459
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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