STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0464PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_8116 aliphatic sulphonate ABC transporter. (273 aa)    
Predicted Functional Partners:
Tcur_0466
KEGG: bid:Bind_0526 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
 0.998
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.997
ssuB-2
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.990
Tcur_1386
PFAM: NMT1/THI5 like domain protein; Substrate- binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3297 putative sulfonate ABC transporter, periplasmic-binding protein.
 
 0.990
Tcur_1376
KEGG: bxe:Bxe_B2406 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein.
 
 
 0.989
Tcur_1384
KEGG: bph:Bphy_5229 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein.
 
 0.989
Tcur_0467
PFAM: Luciferase-like monooxygenase; KEGG: avn:Avin_30500 alkanesulfonate monooxygenase.
 
 0.978
Tcur_1374
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2408 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein.
  
  
 
0.907
Tcur_1385
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3464 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.905
Tcur_1034
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afw:Anae109_3870 ABC transporter related.
  
 0.868
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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