STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0496PFAM: TrkA-N domain protein; KEGG: scl:sce0244 hypothetical protein. (623 aa)    
Predicted Functional Partners:
Tcur_1710
H(+)-transporting two-sector ATPase; PFAM: cation transporter; KEGG: mno:Mnod_7572 cation transporter.
  
 
 0.898
Tcur_2999
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gme:Gmet_0066 Fmu, rRNA SAM-dependent methyltransferase:Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.629
Tcur_3728
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: scl:sce2941 molybdopterin-converting factor chain 2.
   
    0.570
Tcur_0495
PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mxa:MXAN_1393 HSP90 family protein.
     
 0.527
Tcur_4110
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ade:Adeh_2856 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.520
Tcur_0494
KEGG: mxa:MXAN_1392 hypothetical protein.
  
    0.518
Tcur_2390
KEGG: hypothetical protein.
 
     0.494
Tcur_3808
KEGG: ret:RHE_PD00247 hypothetical protein.
  
     0.469
Tcur_0497
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_6105 Ser/Thr protein phosphatase family protein.
       0.443
Tcur_4438
PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: gme:Gmet_3235 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase.
  
    0.426
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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