STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0523Hypothetical protein. (142 aa)    
Predicted Functional Partners:
Tcur_0524
PFAM: methane/phenol/toluene hydroxylase; KEGG: reh:H16_B0540 phenol hydroxylase P1 protein.
       0.791
Tcur_0525
PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5682 monooxygenase component MmoB/DmpM.
       0.791
Tcur_0527
KEGG: avn:Avin_08820 phenol hydroxylase subunit P4.
       0.790
Tcur_0526
PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_A1702 methane/phenol/toluene hydroxylase:YHS.
       0.784
Tcur_0528
PFAM: ferredoxin; KEGG: pmy:Pmen_0311 CDP-6-deoxy-delta-3,4-glucoseen reductase.
       0.752
Tcur_0529
KEGG: bur:Bcep18194_B2964 catechol 2,3-dioxygenase; TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.752
Tcur_0530
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: ppg:PputGB1_3306 oxidoreductase FAD-binding subunit.
       0.496
Tcur_0522
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: scl:sce0700 ATP-independent RNA helicase; Belongs to the DEAD box helicase family.
       0.486
Tcur_0531
PFAM: alpha/beta hydrolase fold; KEGG: dar:Daro_3786 alpha/beta hydrolase fold.
       0.478
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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