STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0556Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: acp:A2cp1_2463 hypothetical protein. (409 aa)    
Predicted Functional Partners:
Tcur_1662
KEGG: mucin-associated surface protein (MASP).
  
     0.637
Tcur_2689
PFAM: protein of unknown function DUF397.
  
     0.635
Tcur_2079
Hypothetical protein.
  
     0.632
Tcur_1151
Hypothetical protein.
  
     0.502
Tcur_0557
Hypothetical protein.
       0.491
Tcur_0558
Hypothetical protein.
       0.491
Tcur_4608
Hypothetical protein; KEGG: rlt:Rleg2_0657 chromosome segregation protein SMC.
  
     0.461
Tcur_4159
PFAM: protein of unknown function DUF397.
  
     0.460
Tcur_4906
KEGG: bxe:Bxe_C1257 hypothetical protein.
  
     0.444
Tcur_3856
PFAM: protein of unknown function DUF541; KEGG: mno:Mnod_1713 protein of unknown function DUF541.
  
     0.426
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.