STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0584KEGG: hypothetical protein. (325 aa)    
Predicted Functional Partners:
Tcur_1101
KEGG: bxe:Bxe_A0786 putative lipoprotein.
  
     0.722
Tcur_1090
KEGG: Os05g0227600; hypothetical protein.
  
     0.704
Tcur_1345
PFAM: NERD domain protein; KEGG: mpt:Mpe_A3609 hypothetical protein.
 
    0.699
Tcur_2837
KEGG: kinetoplast-associated protein-like protein.
 
   
 0.697
Tcur_0878
Chromosome segregation ATPase-like protein; KEGG: hypothetical protein.
  
     0.696
Tcur_0820
KEGG: nha:Nham_3709 hypothetical protein.
  
     0.693
Tcur_0639
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: hypothetical protein.
  
 
   0.688
Tcur_4966
Hypothetical protein.
  
     0.676
Tcur_2918
KEGG: hypothetical protein.
  
     0.669
Tcur_3127
PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: pmy:Pmen_3658 regulatory protein, LuxR.
  
     0.669
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.