STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0597Hypothetical protein. (232 aa)    
Predicted Functional Partners:
Tcur_0600
Hypothetical protein; KEGG: mpo:Mpop_1738 thioredoxin domain.
     
 0.756
Tcur_0599
KEGG: acp:A2cp1_3992 hypothetical protein.
 
     0.732
Tcur_0598
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: afw:Anae109_0250 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.661
Tcur_0603
Hypothetical protein.
 
     0.641
Tcur_2239
Hypothetical protein.
  
     0.616
Tcur_2918
KEGG: hypothetical protein.
  
     0.556
Tcur_0596
PFAM: thiamineS protein.
       0.546
Tcur_1101
KEGG: bxe:Bxe_A0786 putative lipoprotein.
  
     0.536
Tcur_0613
Hypothetical protein; KEGG: GF12424 gene product from transcript GF12424- RA.
  
     0.526
Tcur_4966
Hypothetical protein.
  
     0.523
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.