STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0693Hypothetical protein; KEGG: geo:Geob_2464 beta-propeller repeat TECPR. (369 aa)    
Predicted Functional Partners:
Tcur_4260
PFAM: aminoglycoside phosphotransferase; KEGG: mrd:Mrad2831_4452 aminoglycoside phosphotransferase.
 
     0.678
Tcur_2663
PFAM: aminoglycoside phosphotransferase; KEGG: bba:Bd2045 homoserine kinase.
  
     0.584
Tcur_1364
PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.563
Tcur_0097
PFAM: major facilitator superfamily MFS_1; KEGG: GK10816 gene product from transcript GK10816- RA.
  
     0.562
Tcur_3160
Hypothetical protein.
  
     0.549
Tcur_4514
KEGG: mxa:MXAN_0777 MerR family transcriptional regulator.
  
     0.547
Tcur_1883
PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: scl:sce2388 putative ornithine cyclodeaminase.
  
     0.534
Tcur_1191
Hypothetical protein.
  
     0.514
Tcur_4934
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Tetratricopeptide TPR_4; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: acp:A2cp1_3455 tetratricopeptide TPR_2 repeat protein.
  
     0.513
Tcur_1336
Hypothetical protein.
  
     0.504
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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