STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0709PFAM: homogentisate 12-dioxygenase; Cupin 2 conserved barrel domain protein; KEGG: shm:Shewmr7_2363 homogentisate 1,2- dioxygenase. (397 aa)    
Predicted Functional Partners:
Tcur_1062
KEGG: 4-hydroxyphenylpyruvate dioxygenase, putative; K00457 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
 0.996
Tcur_0706
Fumarylacetoacetase; KEGG: bbt:BBta_0567 fumarylacetoacetate hydrolase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase.
  
 0.962
Tcur_0957
PFAM: homogentisate 12-dioxygenase; KEGG: pmy:Pmen_1697 homogentisate 1,2-dioxygenase.
  
  
 
0.926
Tcur_3717
Tyrosine 3-monooxygenase; PFAM: aromatic amino acid hydroxylase; KEGG: hypothetical protein.
 
  
 0.842
Tcur_0707
KEGG: mucin-associated surface protein (MASP).
 
     0.768
Tcur_3891
TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gsu:GSU3303 methylmalonyl-CoA epimerase.
  
 
 0.747
Tcur_0724
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: hypothetical protein.
  
  
 0.545
Tcur_3538
5-carboxymethyl-2-hydroxymuconateDelta- isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ank:AnaeK_4190 5-carboxymethyl-2- hydroxymuconate delta-isomerase.
  
  
 0.545
Tcur_0710
Hypothetical protein.
  
    0.502
Tcur_1862
PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; KEGG: rpi:Rpic_2413 carbamoyl-phosphate synthase L chain ATP-binding.
  
  
 0.431
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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