STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0781PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: predicted NTPase (NACHT family). (711 aa)    
Predicted Functional Partners:
Tcur_2545
PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: sfu:Sfum_3846 helicase domain protein.
 
 0.808
Tcur_4523
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bid:Bind_1912 TPR repeat-containing protein.
  
 
 0.769
Tcur_0458
PFAM: NB-ARC domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hypothetical protein.
  
 
 0.732
Tcur_4905
PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: bid:Bind_1912 TPR repeat-containing protein.
  
 
 0.712
Tcur_3153
PFAM: metallophosphoesterase; pentapeptide repeat protein; WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: scl:sce3623 hypothetical protein.
 
  
 0.692
Tcur_1843
KEGG: pna:Pnap_3738 hypothetical protein.
    
 0.640
Tcur_1423
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
     0.634
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.630
Tcur_3107
Hypothetical protein; KEGG: scl:sce1440 putative terpene cyclase.
 
     0.628
Tcur_4641
Hypothetical protein; KEGG: scl:sce3803 putative ATP/GTP-binding protein.
  
 
 0.625
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.