STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0817PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_2037 HAD family hydrolase. (206 aa)    
Predicted Functional Partners:
Tcur_3273
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_3045 protein of unknown function DUF224 cysteine-rich region domain protein.
 
  
 0.917
Tcur_1656
PFAM: ribulose bisphosphate carboxylase small chain; KEGG: bbt:BBta_0452 ribulose 1,5-bisphosphate carboxylase small subunit.
    
 0.913
Tcur_1655
PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit- like; KEGG: rpt:Rpal_1747 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
    
 0.909
Tcur_0108
PFAM: FAD linked oxidase domain protein; KEGG: dol:Dole_0002 FAD linked oxidase domain- containing protein.
    
 0.906
Tcur_3271
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: afw:Anae109_2921 D-lactate dehydrogenase (cytochrome).
    
 0.906
Tcur_3272
PFAM: FAD linked oxidase domain protein; KEGG: afw:Anae109_2920 FAD linked oxidase domain- containing protein.
    
 0.906
Tcur_0948
KEGG: ade:Adeh_0672 haloacid dehalogenase-like hydrolase.
  
  
 
0.904
Tcur_4015
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ank:AnaeK_0706 haloacid dehalogenase domain protein hydrolase.
     
  0.900
Tcur_0818
PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sat:SYN_01437 cold shock protein.
       0.627
Tcur_1821
Chromosome segregation ATPase-like protein; KEGG: vesicular transport-associated repeat protein.
 
 
   0.601
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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