STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0830KEGG: scl:sce0154 hypothetical protein. (330 aa)    
Predicted Functional Partners:
Tcur_0829
Hypothetical protein.
       0.566
Tcur_4939
Hypothetical protein.
  
     0.559
Tcur_4837
PFAM: type II secretion system protein; KEGG: bav:BAV2284 pilus assembly protein.
  
    0.499
Tcur_3608
TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP; KEGG: mxa:MXAN_7498 signal peptide peptidase SppA, 67K type.
  
    0.473
Tcur_4041
Hypothetical protein.
  
     0.464
Tcur_2275
Zn-dependent protease and their inactivated protein-like protein; KEGG: ccs:CCNA_02915 microcin-processing peptidase 1 (PmbA).
 
     0.463
Tcur_4177
Hypothetical protein; KEGG: acp:A2cp1_2118 MJ0042 family finger-like protein.
 
     0.462
Tcur_0828
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.437
Tcur_1071
PFAM: protein of unknown function DUF255; KEGG: acp:A2cp1_1001 protein of unknown function DUF255.
    
 
 0.415
Tcur_2276
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sml:Smlt0130 putative modulator of DNA gyrase.
 
     0.400
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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