STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0866PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; KEGG: hypothetical protein. (137 aa)    
Predicted Functional Partners:
Tcur_4772
PFAM: regulatory protein TetR; KEGG: scl:sce5559 HTH-type transcriptional regulator BetI.
  
     0.740
Tcur_1364
PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 
 0.670
Tcur_3256
Hypothetical protein.
 
 
 
 0.605
Tcur_0867
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: acp:A2cp1_1581 RNA polymerase, sigma-24 subunit, ECF subfamily.
   
   0.583
Tcur_0865
PFAM: ANTAR domain protein; KEGG: atc:AGR_L_1879 response regulator NasT.
       0.581
Tcur_2445
Hypothetical protein.
  
     0.579
Tcur_2690
PFAM: aminoglycoside phosphotransferase; KEGG: smt:Smal_1721 aminoglycoside phosphotransferase.
  
     0.540
Tcur_0372
PFAM: protein of unknown function DUF397.
  
     0.526
Tcur_2804
PFAM: protein of unknown function DUF742.
  
     0.519
Tcur_2367
PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: bba:Bd3234 carboxypeptidase T precursor.
  
     0.513
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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