STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0951PFAM: SpoOM family protein; KEGG: vfm:VFMJ11_1291 sporulation-control protein. (397 aa)    
Predicted Functional Partners:
Tcur_0133
SMART: helix-turn-helix domain protein.
  
     0.541
Tcur_0751
SMART: helix-turn-helix domain protein; KEGG: ade:Adeh_2124 serine/threonine protein kinase.
  
     0.499
Tcur_4179
KEGG: gbm:Gbem_1481 transglycosylase-associated protein.
 
     0.497
Tcur_1994
Putative transmembrane anti-sigma factor; KEGG: acp:A2cp1_0253 Fe-S oxidoreductase.
  
    0.481
Tcur_4688
PFAM: band 7 protein; KEGG: mxa:MXAN_3571 hypothetical protein.
  
    0.460
Tcur_4000
PFAM: protein of unknown function DUF540; KEGG: pap:PSPA7_4674 putative sulfate transport protein CysZ.
  
     0.459
Tcur_1275
Acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like protein; KEGG: bja:bll0558 hypothetical protein.
  
     0.440
Tcur_4734
KEGG: csa:Csal_2715 hypothetical protein.
  
     0.436
Tcur_2341
KEGG: hypothetical protein.
 
     0.430
Tcur_2367
PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: bba:Bd3234 carboxypeptidase T precursor.
  
     0.425
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.