STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_0971PFAM: major facilitator superfamily MFS_1; KEGG: sml:Smlt0548 putative MFS family transporter. (412 aa)    
Predicted Functional Partners:
Tcur_0970
PFAM: Mg2 transporter protein CorA family protein; KEGG: esa:ESA_00858 hypothetical protein.
       0.545
Tcur_2663
PFAM: aminoglycoside phosphotransferase; KEGG: bba:Bd2045 homoserine kinase.
  
     0.474
Tcur_0848
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: rlt:Rleg2_5436 transcriptional regulator, LuxR family.
  
   
 0.465
Tcur_2837
KEGG: kinetoplast-associated protein-like protein.
  
     0.426
Tcur_0878
Chromosome segregation ATPase-like protein; KEGG: hypothetical protein.
  
     0.413
Tcur_2965
Hypothetical protein; KEGG: transporter.
  
     0.409
Tcur_3402
PFAM: Protein of unknown function DUF1963; KEGG: cco:CCC13826_0556 peptide methionine sulfoxide reductase MsrA/MsrB.
  
     0.400
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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