STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1101KEGG: bxe:Bxe_A0786 putative lipoprotein. (782 aa)    
Predicted Functional Partners:
Tcur_1100
SMART: AAA ATPase; KEGG: rsq:Rsph17025_4376 type IV secretion/conjugal transfer ATPase.
 
    0.951
Tcur_1098
ATPase involved in chromosome partitioning-like protein; KEGG: SL44-1; basic proline-rich protein.
 
     0.913
Tcur_1103
PFAM: NLP/P60 protein; Lytic transglycosylase catalytic; KEGG: tgr:Tgr7_1402 NLP/P60 protein.
 
     0.793
Tcur_1102
Hypothetical protein; KEGG: ank:AnaeK_0191 SNF2 superfamily protein.
       0.789
Tcur_0639
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: hypothetical protein.
  
     0.772
Tcur_1345
PFAM: NERD domain protein; KEGG: mpt:Mpe_A3609 hypothetical protein.
  
     0.770
Tcur_1336
Hypothetical protein.
  
     0.768
Tcur_1598
Hypothetical protein.
  
     0.763
Tcur_2244
PFAM: sulfotransferase; KEGG: similar to Dermatan-sulfate epimerase-like protein.
  
     0.762
Tcur_1989
Hypothetical protein; KEGG: sbp:Sbal223_2107 NERD domain protein.
  
     0.761
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.