Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tcur_1255 | Tcur_1256 | Tcur_1255 | Tcur_1256 | KEGG: hypothetical protein. | KEGG: rpe:RPE_3886 hypothetical protein. | 0.636 |
Tcur_1255 | Tcur_1257 | Tcur_1255 | Tcur_1257 | KEGG: hypothetical protein. | Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ade:Adeh_2233 GntR family transcriptional regulator. | 0.433 |
Tcur_1255 | orn | Tcur_1255 | Tcur_1254 | KEGG: hypothetical protein. | Exonuclease RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.644 |
Tcur_1256 | Tcur_1255 | Tcur_1256 | Tcur_1255 | KEGG: rpe:RPE_3886 hypothetical protein. | KEGG: hypothetical protein. | 0.636 |
Tcur_1256 | Tcur_1257 | Tcur_1256 | Tcur_1257 | KEGG: rpe:RPE_3886 hypothetical protein. | Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ade:Adeh_2233 GntR family transcriptional regulator. | 0.831 |
Tcur_1256 | orn | Tcur_1256 | Tcur_1254 | KEGG: rpe:RPE_3886 hypothetical protein. | Exonuclease RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.527 |
Tcur_1257 | Tcur_1255 | Tcur_1257 | Tcur_1255 | Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ade:Adeh_2233 GntR family transcriptional regulator. | KEGG: hypothetical protein. | 0.433 |
Tcur_1257 | Tcur_1256 | Tcur_1257 | Tcur_1256 | Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ade:Adeh_2233 GntR family transcriptional regulator. | KEGG: rpe:RPE_3886 hypothetical protein. | 0.831 |
orn | Tcur_1255 | Tcur_1254 | Tcur_1255 | Exonuclease RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | KEGG: hypothetical protein. | 0.644 |
orn | Tcur_1256 | Tcur_1254 | Tcur_1256 | Exonuclease RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | KEGG: rpe:RPE_3886 hypothetical protein. | 0.527 |