STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1500KEGG: hypothetical protein. (484 aa)    
Predicted Functional Partners:
Tcur_1499
Hypothetical protein.
       0.810
Tcur_1497
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dac:Daci_3842 protein serine/threonine phosphatase.
   
   0.801
Tcur_1498
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pna:Pnap_4669 von Willebrand factor, type A.
       0.800
Tcur_1496
Hypothetical protein; KEGG: pna:Pnap_4279 alkaline phosphatase domain- containing protein.
       0.787
Tcur_2545
PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: sfu:Sfum_3846 helicase domain protein.
  
 0.782
Tcur_1494
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: hch:HCH_03463 Lhr-like helicase.
       0.779
Tcur_1495
KEGG: hch:HCH_03464 methyl-accepting chemotaxis protein.
       0.778
Tcur_1843
KEGG: pna:Pnap_3738 hypothetical protein.
    
 0.640
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.630
Tcur_2285
KEGG: hypothetical protein.
    
 0.558
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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