STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1610Hypothetical protein. (76 aa)    
Predicted Functional Partners:
Tcur_1636
Hypothetical protein.
  
     0.699
Tcur_1611
KEGG: DNA topoisomerase, ATP-hydrolyzing, putative.
 
     0.633
Tcur_3879
PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: sde:Sde_1925 GGDEF family protein.
 
     0.633
Tcur_0289
PFAM: methyltransferase small; KEGG: ppd:Ppro_3005 HemK family modification methylase; Belongs to the methyltransferase superfamily.
  
     0.595
Tcur_1762
Hypothetical protein.
  
     0.588
Tcur_3086
Hypothetical protein.
  
     0.520
Tcur_1609
PFAM: protein of unknown function DUF328; KEGG: sun:SUN_0122 hypothetical protein; Belongs to the UPF0246 family.
       0.510
Tcur_1697
Hypothetical protein.
  
     0.499
Tcur_2939
Hypothetical protein.
  
     0.475
Tcur_3303
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rlt:Rleg2_4257 transcriptional regulator, XRE family.
  
     0.459
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.