STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1930KEGG: oca:OCAR_5317 hypothetical protein. (269 aa)    
Predicted Functional Partners:
Tcur_1929
Carnitine O-acetyltransferase; PFAM: acyltransferase ChoActase/COT/CPT family; KEGG: ppr:PBPRB1741 carnitine O-acyltransferase; Belongs to the carnitine/choline acetyltransferase family.
     0.970
Tcur_1931
KEGG: csa:Csal_2883 hypothetical protein.
 
     0.901
Tcur_4804
PFAM: putative esterase; KEGG: mxa:MXAN_4935 putative esterase.
  
     0.591
Tcur_3901
Hypothetical protein.
  
     0.590
Tcur_1944
SMART: helix-turn-helix domain protein.
  
     0.556
Tcur_1836
PFAM: putative esterase; KEGG: mxa:MXAN_4935 putative esterase.
 
     0.535
Tcur_4835
PFAM: putative esterase; KEGG: mxa:MXAN_4935 putative esterase.
  
     0.522
Tcur_1305
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sme:SMc00351 hypothetical protein.
  
     0.514
Tcur_0718
PFAM: protein of unknown function DUF397.
  
     0.509
Tcur_0418
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_0878 cupin 2 domain-containing protein.
  
     0.501
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.