STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1978PFAM: regulatory protein TetR; KEGG: bbr:BB2291 TetR family transcriptional regulator. (195 aa)    
Predicted Functional Partners:
Tcur_1977
Methylcrotonoyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bpt:Bpet0056 putative methylcrotonyl-CoA carboxylase subunit.
 
   
 0.703
Tcur_1974
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dat:HRM2_10010 Acd3.
 
     0.616
Tcur_1976
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mpt:Mpe_A3356 3-methylcrotonoyl-CoA carboxylase, alpha subunit.
   
 
 0.608
Tcur_3352
PFAM: regulatory protein TetR; KEGG: hch:HCH_05743 transcriptional regulator.
  
     0.577
Tcur_1975
PFAM: pyruvate carboxyltransferase; KEGG: xau:Xaut_1854 pyruvate carboxyltransferase.
       0.561
Tcur_1867
PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A4897 TetR family transcriptional regulator.
  
     0.541
Tcur_2723
PFAM: regulatory protein TetR; KEGG: azc:AZC_4590 transcriptional regulator.
  
     0.540
Tcur_4852
PFAM: NUDIX hydrolase; KEGG: pna:Pnap_2699 NUDIX hydrolase.
  
     0.448
Tcur_3833
PFAM: regulatory protein TetR; KEGG: hha:Hhal_0130 TetR family transcriptional regulator.
  
     0.447
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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