STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2000TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eba:ebA3917 putative iron-sulfur binding protein. (481 aa)    
Predicted Functional Partners:
Tcur_2001
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sfu:Sfum_0079 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 0.997
Tcur_1999
PFAM: protein of unknown function DUF162; KEGG: bpy:Bphyt_2931 protein of unknown function DUF162.
 
 0.991
Tcur_2425
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sfu:Sfum_0079 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 0.989
Tcur_2423
PFAM: protein of unknown function DUF162; KEGG: sfu:Sfum_0391 protein of unknown function DUF162.
 
 0.975
Tcur_3273
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_3045 protein of unknown function DUF224 cysteine-rich region domain protein.
 
 0.724
Tcur_0728
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: scl:sce2118 putative oxidoreductase.
  
 
 0.672
Tcur_0242
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: afw:Anae109_0009 hypothetical protein.
  
 
 0.560
Tcur_4391
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: eba:ebA3149 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
  
 0.550
Tcur_2093
PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein; KEGG: net:Neut_1995 phosphate acetyltransferase.
  
  
 0.483
Tcur_2002
KEGG: rle:pRL120266 hypothetical protein.
       0.472
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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