STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2010PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. (521 aa)    
Predicted Functional Partners:
Tcur_3018
PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3710 EmrB/QacA family drug resistance transporter.
  
   
 0.760
Tcur_2009
KEGG: scl:sce0694 hydrolase, alpha/beta fold family protein.
     
 0.598
Tcur_4819
PFAM: major facilitator superfamily MFS_1; KEGG: smt:Smal_0925 major facilitator superfamily MFS_1.
  
   
 0.516
Tcur_2011
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: short chain dehydrogenase/reductase family.
   
 0.498
Tcur_3347
TIGRFAM: 3-oxoadipate enol-lactonase; 4- carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; alpha/beta hydrolase fold; KEGG: met:M446_4655 3-oxoadipate enol-lactonase.
  
  
 0.479
Tcur_4943
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_2162 MATE efflux family protein.
  
  
 0.434
Tcur_4285
PFAM: SCP-like extracellular; KEGG: scl:sce1577 putative beta-galactosidase.
    
 0.415
Tcur_1273
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sfu:Sfum_1119 ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
 0.412
Tcur_2008
PFAM: helix-turn-helix HxlR type; KEGG: scl:sce2380 putative transcriptional regulator.
  
    0.405
Tcur_1886
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
    
 0.404
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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