STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2014KEGG: pzu:PHZ_c1140 hypothetical protein. (230 aa)    
Predicted Functional Partners:
Tcur_1633
Hypothetical protein; KEGG: ank:AnaeK_0897 PDZ/DHR/GLGF domain protein.
  
     0.692
Tcur_2781
PFAM: Acyl transferase; short-chain dehydrogenase/reductase SDR; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; KR domain protein; Alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: pst:PSPTO_4686 coronafacic acid polyketide synthase I.
  
 
 0.650
Tcur_2015
PFAM: UspA domain protein; KEGG: aci:ACIAD1277 hypothetical protein.
       0.590
Tcur_1668
PFAM: Beta-ketoacyl synthase; KR domain protein; Acyl transferase; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase NPD; KEGG: avn:Avin_29560 type I fatty acid synthase ArsA.
  
 
 0.510
Tcur_0221
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: csa:Csal_1600 [acyl-carrier-protein] S- malonyltransferase.
  
 
 0.453
Tcur_1641
KEGG: bpd:BURPS668_2791 malonyl CoA-acyl carrier protein transacylase.
  
 
 0.453
Tcur_4756
PFAM: Acyl transferase; KR domain protein; Beta- ketoacyl synthase; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase.
  
 
 0.448
Tcur_2782
PFAM: Beta-ketoacyl synthase; Acyl transferase; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase.
  
 
 0.438
Tcur_2783
PFAM: Acyl transferase; KEGG: avi:Avi_7309 polyketide synthase.
  
 
 0.438
Tcur_1886
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
  
 
 0.422
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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