STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2037PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bpt:Bpet3249 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Tcur_2036
PFAM: protein of unknown function DUF81; KEGG: mxa:MXAN_0177 membrane protein.
 
  
 0.959
Tcur_2038
PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: gsu:GSU2309 metallo-beta-lactamase family protein.
 
 
 0.929
Tcur_2039
PFAM: protein of unknown function DUF156; KEGG: dia:Dtpsy_1807 protein of unknown function DUF156.
 
   
 0.842
Tcur_3176
PFAM: beta-lactamase domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gsu:GSU2309 metallo-beta-lactamase family protein.
 
 
 0.738
Tcur_1886
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
  
   0.720
Tcur_0732
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.646
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.593
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: ade:Adeh_1971 phenylalanyl-tRNA synthetase beta subunit.
     
 0.498
rplQ
TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: geo:Geob_3598 ribosomal protein L17.
  
   0.454
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.452
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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