STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2050KEGG: bja:bll0558 hypothetical protein. (436 aa)    
Predicted Functional Partners:
Tcur_1498
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pna:Pnap_4669 von Willebrand factor, type A.
  
     0.719
Tcur_4775
Multi-sensor signal transduction histidine kinase; KEGG: bbt:BBta_6262 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein.
 
   
 0.634
Tcur_0940
Hypothetical protein; KEGG: pen:PSEEN5551 chromosomal partitioning protein ParB.
  
     0.631
Tcur_4776
Multi-sensor hybrid histidine kinase; KEGG: reu:Reut_B4539 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein.
  
   
 0.612
Tcur_1247
Hypothetical protein; KEGG: similar to hyaluronan receptor for endocytosis HARE precursor.
  
     0.582
Tcur_0280
PFAM: glycoside hydrolase family 13 domain protein; KEGG: dde:Dde_2682 isoamylase protein-like.
 
     0.581
Tcur_2051
KEGG: pla:Plav_2299 hypothetical protein.
       0.470
Tcur_1605
PFAM: Radical SAM domain protein; KEGG: pzu:PHZ_c2389 hypothetical protein.
  
     0.460
Tcur_1402
KEGG: hypothetical protein.
 
     0.447
Tcur_1110
KEGG: pap:PSPA7_2529 putative radical activating enzyme.
 
     0.421
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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