STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2055PFAM: polysaccharide deacetylase; KEGG: mrd:Mrad2831_4617 polysaccharide deacetylase. (341 aa)    
Predicted Functional Partners:
Tcur_2056
Conserved hypothetical protein; KEGG: afr:AFE_2171 GTP-binding protein.
     0.966
Tcur_3588
PFAM: glycosyl transferase family 2; KEGG: rle:pRL110395 putative succinoglycan biosynthesis protein.
  
  
 0.423
Tcur_4113
PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0604 putative glycosyl transferase.
  
  
 0.423
Tcur_4186
PFAM: glycosyl transferase family 2; KEGG: hypothetical protein.
  
  
 0.423
Tcur_3548
Hypothetical protein.
  
  
 0.415
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.