STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2162PFAM: protein of unknown function DUF839; KEGG: pat:Patl_2607 twin-arginine translocation pathway signal. (389 aa)    
Predicted Functional Partners:
Tcur_4373
PFAM: integrase family protein; KEGG: rpa:RPA0182 site-specific tyrosine recombinase XerC.
  
     0.522
Tcur_1769
KEGG: cak:Caul_1743 alkaline phosphatase.
 
  
 0.493
Tcur_3943
PFAM: integrase family protein; KEGG: pzu:PHZ_c3335 integrase/recombinase XerC.
  
     0.463
Tcur_0085
TrkA domain protein; Putative regulatory ligand-binding protein related to C-terminal domains of K+ channels-like protein.
  
     0.443
Tcur_4231
KEGG: psa:PST_3683 Tat (twin-arginine translocation) pathway signal sequence domain protein.
  
 0.426
Tcur_1929
Carnitine O-acetyltransferase; PFAM: acyltransferase ChoActase/COT/CPT family; KEGG: ppr:PBPRB1741 carnitine O-acyltransferase; Belongs to the carnitine/choline acetyltransferase family.
  
     0.423
Tcur_1930
KEGG: oca:OCAR_5317 hypothetical protein.
  
     0.418
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.