STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2299Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bja:blr1357 peptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (391 aa)    
Predicted Functional Partners:
Tcur_2295
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_21570 DppC1.
 0.999
Tcur_2716
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4379 binding-protein-dependent transport systems inner membrane component.
 
 0.987
Tcur_3277
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component.
 
 0.987
Tcur_4714
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0937 binding-protein-dependent transport systems inner membrane component.
 
 0.986
Tcur_2297
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_5632 ABC transporter membrane spanning protein (oligopeptide).
  
 0.967
Tcur_2296
PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc04293 putative peptide-binding periplasmic ABC transporter protein.
 
 
 0.922
Tcur_2298
KEGG: bja:bll2870 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
   
0.915
Tcur_2717
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_2185 ABC transporter, inner membrane subunit.
  
 0.870
Tcur_4715
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_1187 binding-protein-dependent transport systems inner membrane component.
  
 0.860
Tcur_3278
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1834 binding-protein-dependent transport systems inner membrane component.
  
 0.858
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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