STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2759PFAM: C-methyltransferase; Methyltransferase domain protein; Methyltransferase type 12; Methyltransferase type 11; KEGG: mrd:Mrad2831_1221 C-methyltransferase. (405 aa)    
Predicted Functional Partners:
Tcur_2777
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gbm:Gbem_3307 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.962
Tcur_2791
PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: pca:Pcar_1129 dTDP-4-dehydrorhamnose 3,5- epimerase.
  
 
 0.927
Tcur_2760
PFAM: NDP-hexose 23-dehydratase; KEGG: geo:Geob_0428 NDP-hexose 23-dehydratase.
 
   
 0.711
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.624
Tcur_1217
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: dol:Dole_1806 methyltransferase type 11.
  
     0.581
Tcur_1723
PFAM: metallophosphoesterase; KEGG: scl:sce2733 bis(5'-nucleosyl)- tetraphosphatase (symmetrical).
   
   0.523
Tcur_0641
Hypothetical protein.
      
 0.452
Tcur_2761
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_2795 nogalamycin resistance protein SnorO.
  
    0.414
Tcur_2762
PFAM: NAD-dependent epimerase/dehydratase; KEGG: mxa:MXAN_5328 GDP-4-dehydro-6-deoxy-D-mannose reductase.
 
   
 0.414
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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