STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2813PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein. (331 aa)    
Predicted Functional Partners:
Tcur_2436
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; Parallel beta- helix repeat; KEGG: hypothetical protein.
 
   
 0.785
Tcur_3175
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: xac:XAC4133 hypothetical protein.
 
     0.595
Tcur_1738
PFAM: glycoside hydrolase family 6; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
 
  
 0.563
Tcur_0207
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
 
      0.512
Tcur_2814
Putative PAS/PAC sensor protein; PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein; KEGG: gme:Gmet_2062 serine phosphatase.
       0.450
Tcur_1343
KEGG: xcv:XCV3483 putative secreted protein.
  
     0.426
Tcur_0628
PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
    
0.410
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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