STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3126Hypothetical protein; KEGG: Pef1; penta-EF hand domain containing 1. (408 aa)    
Predicted Functional Partners:
Tcur_3124
PFAM: copper resistance D domain protein; KEGG: csa:Csal_0081 hypothetical protein.
 
     0.570
Tcur_4687
KEGG: scl:sce5238 hypothetical protein.
  
     0.557
Tcur_4806
Hypothetical protein.
  
     0.551
Tcur_3125
Hypothetical protein.
       0.524
Tcur_3050
PFAM: metallophosphoesterase; KEGG: sit:TM1040_3062 metallophosphoesterase.
  
     0.522
Tcur_4688
PFAM: band 7 protein; KEGG: mxa:MXAN_3571 hypothetical protein.
  
     0.493
Tcur_1608
KEGG: sml:Smlt2670 hypothetical protein.
  
     0.488
Tcur_4689
KEGG: mxa:MXAN_3572 hypothetical protein.
  
     0.487
Tcur_4586
PFAM: NACHT nucleoside triphosphatase; KEGG: pmy:Pmen_1048 signal transduction protein.
  
     0.474
Tcur_2675
Hypothetical protein.
  
     0.465
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.