STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3201PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cak:Caul_0148 amine oxidase. (535 aa)    
Predicted Functional Partners:
Tcur_4452
PFAM: histone deacetylase superfamily; KEGG: gsu:GSU1222 histone deacetylase/AcuC/AphA family protein.
   
 0.976
Tcur_3200
PFAM: Endoribonuclease L-PSP; KEGG: LAO2; mbeta non-catalytic subunit of periplasmic L-amino acid oxidase.
 
  
 0.953
Tcur_0851
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
    
 0.908
Tcur_1827
PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1170 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.908
Tcur_2580
PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1170 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.908
Tcur_2022
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sfu:Sfum_0829 alcohol dehydrogenase GroES domain protein.
    
  0.902
Tcur_2810
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: reu:Reut_C6082 zinc-containing alcohol dehydrogenase superfamily protein.
    
  0.902
Tcur_1032
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msl:Msil_3430 alcohol dehydrogenase GroES domain protein.
    
  0.901
Tcur_2545
PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: sfu:Sfum_3846 helicase domain protein.
   
 0.818
Tcur_3580
PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mxa:MXAN_7274 SNF2/helicase domain-containing protein.
    
 0.742
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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