STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3375PFAM: protein of unknown function DUF308 membrane; KEGG: pap:PSPA7_6196 hypothetical protein. (192 aa)    
Predicted Functional Partners:
Tcur_4586
PFAM: NACHT nucleoside triphosphatase; KEGG: pmy:Pmen_1048 signal transduction protein.
  
    0.645
Tcur_0677
KEGG: rso:RS03193 hypothetical protein.
  
     0.449
Tcur_0158
Hypothetical protein.
  
     0.430
Tcur_1487
PFAM: transcriptional regulator PadR family protein; KEGG: bmj:BMULJ_03145 PadR-like family transcriptional regulator.
  
     0.402
Tcur_2531
PFAM: Pyridoxal-dependent decarboxylase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase.
   
  
 0.400
Tcur_2562
PFAM: Pyridoxal-dependent decarboxylase; KEGG: bpl:BURPS1106A_A2756 sphingosine-1-phosphate lyase.
   
  
 0.400
Tcur_3961
PFAM: Pyridoxal-dependent decarboxylase; aminotransferase class V; KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase.
   
  
 0.400
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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