STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3389PFAM: membrane-flanked domain; KEGG: bja:bll0215 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Tcur_3068
KEGG: nmu:Nmul_A2002 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein.
 
     0.654
Tcur_1685
PFAM: membrane-flanked domain; KEGG: xcv:XCV3917 hypothetical protein.
 
  
 0.555
Tcur_3184
Hypothetical protein.
  
     0.548
Tcur_3388
Hypothetical protein.
       0.524
Tcur_3183
KEGG: hypothetical protein.
 
    0.480
Tcur_1700
KEGG: pat:Patl_3588 hypothetical protein.
  
     0.471
Tcur_3608
TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP; KEGG: mxa:MXAN_7498 signal peptide peptidase SppA, 67K type.
 
    0.471
Tcur_4496
PFAM: membrane-flanked domain; KEGG: sde:Sde_3048 hypothetical protein.
  
  
 0.439
Tcur_0584
KEGG: hypothetical protein.
  
     0.431
Tcur_3565
PFAM: Methionine synthase vitamin-B12 independent; KEGG: dal:Dalk_5194 hypothetical protein.
  
     0.424
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.