STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3392PFAM: FAD dependent oxidoreductase; KEGG: cps:CPS_0095 hypothetical protein. (464 aa)    
Predicted Functional Partners:
Tcur_3395
PFAM: extracellular solute-binding protein family 1; KEGG: ccs:CCNA_03239 spermidine/putrescine-binding protein.
 
   
 0.908
Tcur_3032
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpy:Bphyt_4247 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.900
Tcur_3394
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_5175 polyamine ABC transporter, permease protein.
 
    0.880
Tcur_3393
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: har:HEAR2849 spermidine/putrescine ABC transporter inner membrane protein.
 
     0.863
Tcur_1578
PFAM: aminotransferase class-III; KEGG: bac:BamMC406_5857 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.845
Tcur_3398
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator.
 
   
 0.815
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.807
Tcur_3397
PFAM: Aldehyde Dehydrogenase; KEGG: abc:ACICU_01133 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.598
Tcur_2627
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator.
 
     0.541
Tcur_0217
PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bba:Bd0684 aminomethyltransferase; Belongs to the GcvT family.
  
 
 0.525
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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