STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3395PFAM: extracellular solute-binding protein family 1; KEGG: ccs:CCNA_03239 spermidine/putrescine-binding protein. (416 aa)    
Predicted Functional Partners:
Tcur_3393
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: har:HEAR2849 spermidine/putrescine ABC transporter inner membrane protein.
 
 0.999
Tcur_3394
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_5175 polyamine ABC transporter, permease protein.
 
 0.996
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.994
Tcur_0448
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcm:Bcenmc03_3606 binding-protein-dependent transport systems inner membrane component.
  
 0.990
Tcur_0447
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_3448 binding-protein-dependent transport systems inner membrane component.
  
 0.926
Tcur_3392
PFAM: FAD dependent oxidoreductase; KEGG: cps:CPS_0095 hypothetical protein.
 
   
 0.908
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.889
Tcur_2820
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cti:RALTA_B0101 putative ABC transporter, ATP- binding component.
  
 0.658
Tcur_2906
PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll2947 hypothetical protein.
 
   
 0.656
Tcur_3398
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator.
 
     0.611
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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